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SRX004778: Sequencing and assembly of Actinomyces graevenitzii C83 genome for HMP Jumpstart project.
1 LS454 (454 GS FLX Titanium) run: 2,560 spots, 1.5M bases, 3.3Mb downloads

UUID: 1ea32d36-363a-4007-8334-05caf458648f
Design: 10X fragment coverage and 10X physical paired coverage on 454
Submitted by: Broad Institute (BI)
Study: Reference genome for the Human Microbiome Project
PRJNA38761 • SRP001073 • All experiments • All runs
show Abstracthide Abstract
<b><i>Actinomyces graevenitzii</i> C83</b>. This strain will be used for comparative genome analysis.
Sample: Generic sample from Actinomyces graevenitzii C83
SAMN00103211 • SRS004699 • All experiments • All runs
Organism: Actinomyces graevenitzii C83
Library:
Name: 454-2828
Instrument: 454 GS FLX Titanium
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: SINGLE
Spot descriptor:
          barcode
Group tagBasecalls
SeoulAACCTGGC
13  forward

Experiment attributes: (show all 7 attributes...) (hide...)
analysis_type: Bacterial 454 Alignment and Assembly
gssr_id: 28787.1
lsid: BROAD:SEQUENCING_SAMPLE:28787.1
material_type: Genomic DNA
project: G2109
sample_type: Sputum
work_request: 19093
Pipeline: show...hide...
NameStepProgramVersion
base caller2009-05-04 13:38:55.0454BaseCaller2.0.00.22
Runs: 1 run, 2,560 spots, 1.5M bases, 3.3Mb
Run# of Spots# of BasesSizePublished
SRR1383622,5601.5M3.3Mb2011-03-27

ID:
5034

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